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WormBase Tree Display for Gene: WBGene00305149

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Name Class

WBGene00305149SMapS_parentSequencePPA_ChrI
IdentityVersion4
NameCGC_namePpa-acc-3From_analysisInferred_from_orthology
Sequence_namePPA47258
Molecular_namePPA47258
PPA47258.1
PP75544
Public_namePpa-acc-3
SpeciesPristionchus pacificus
HistoryVersion_change121 Nov 2019 15:27:34WBPerson4055EventSplit_fromWBGene00114914
204 Feb 2020 15:43:56WBPerson1983Name_changeCGC_namePpa-acc-3
328 May 2021 19:05:21WBPerson1983Name_changeCGC_nameRemoved
428 Jul 2021 11:12:28WBPerson1983Name_changeCGC_namePpa-acc-3
Split_fromWBGene00114914
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classacc
RNASeq_FPKMWBls:00000326.21731From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010111.0469From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
26.9235From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
6.21731From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
GO_annotation00303534
00303535
00303536
00303537
00303538
00303539
OrthologWBGene00163765Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00034995Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00221338Brugia malayiFrom_analysisWormBase-Compara
WBGene00018880Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00126981Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00238864Onchocerca volvulusFrom_analysisWormBase-Compara
CBOVI.g2320Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g7227Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g21999Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g19073Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g15516Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g23401Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g8401Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g13021Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g26702Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g12418Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00035.g1983Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00035.g1984Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-acc-3Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold622.g6297Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00053.g2685Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_00618Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_024309Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g04445Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g17603Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_X0250900Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00051789Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00264233Strongyloides rattiFrom_analysisWormBase-Compara
chrX_pilon.g18962Caenorhabditis elegansFrom_analysisWormBase-Compara
ParalogWBGene00089598Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00089887Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00090048Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00090088Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00090600Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00091469Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00091715Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00091902Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00092293Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00092487Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00092568Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00092927Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00092981Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00093398Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00093507Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00093530Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00093792Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00094886Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00095232Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00095523Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00095561Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00095792Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00096180Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00096314Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00096447Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00096737Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00097397Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00097528Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00099077Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00099079Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00099222Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00099957Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00100028Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00100131Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00100149Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00100788Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00101220Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00101436Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00101775Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00102150Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00102369Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00102482Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00103120Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00103670Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00104997Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00105130Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00105387Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00105475Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00105945Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00106281Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00106447Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00106840Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00106841Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00107167Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00107421Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00107500Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00107864Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00107918Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00107966Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00108006Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00108106Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00108406Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00109103Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00109238Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00109439Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00109732Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00110178Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00110305Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00110842Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00111295Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00111807Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00112012Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00113091Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00113305Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00113472Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00113693Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00114106Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00114665Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00114769Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00115250Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00115506Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00115536Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00116165Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00116273Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00116652Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00116671Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00116699Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00117414Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00118382Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00118813Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00119089Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00119191Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00204046Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00272915Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00272918Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00273181Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00273506Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00274031Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00274324Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00274759Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00276039Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00276047Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00276280Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00277073Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00277528Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00277591Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00277660Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00278203Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00278589Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00279258Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00279699Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00279750Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00279938Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00280196Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00280443Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00280697Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00284058Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00304838Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00305088Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00305140Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable extracellular ligand-gated monoatomic ion channel activity and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans acc-3.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA47258
Corresponding_transcriptPPA47258.1
Other_sequenceJI169509.1
Acan_isotig10368
ACC07809_1
HBC13337_1
FC541338.1
Oden_isotig28984
EX913512.1
EX560156.1
Dviv_isotig28909
Experimental_infoMicroarray_resultsGPL14372_Probes_37165
GPL14372_Probes_68261
GPL14372_Probes_68262
GPL14372_Probes_68263
GPL14372_Probes_68264
GPL14372_Probes_68265
GPL14372_Probes_68266
Expression_clusterWBPaper00041466:PP_germline-ablation_regulated
Remark[210528 pad] The CGC name Ppa-acc-3 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene