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WormBase Tree Display for Gene: WBGene00032318

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Name Class

WBGene00032318SMapS_parentSequencecb25.fpc2454a2
IdentityVersion2
NameCGC_nameCbr-agr-1From_analysisInferred_from_orthology
Sequence_nameCBG11147
Molecular_nameCBG11147a
CBG11147a.1
CBP41262
CBG11147b
CBP39136
CBG11147c
CBP46425
CBG11147b.1
CBG11147c.1
Other_nameCBG_11147Accession_evidenceNDBHE601002
Public_nameCbr-agr-1
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:01WBPerson1971EventImportedInitial conversion from brigace
215 Oct 2007 15:19:45WBPerson2970Name_changeCGC_nameCbr-agr-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classagr
AlleleWBVar00116611
WBVar00012807
WBVar00116581
WBVar00116623
WBVar00116587
WBVar00116617
WBVar00116593
WBVar00116605
WBVar00012822
WBVar00116599
WBVar00116618
WBVar00116624
WBVar00116594
WBVar00116606
WBVar00116600
WBVar00116582
WBVar00116612
WBVar00116588
WBVar00012812
WBVar00116607
WBVar00116583
WBVar00116625
WBVar00116619
WBVar00116595
WBVar00012827
WBVar00116601
WBVar00116613
WBVar00116589
WBVar00116596
WBVar00116590
WBVar00116584
WBVar00116614
WBVar00116620
WBVar00116608
WBVar00116602
WBVar00116597
WBVar00116591
WBVar00116579
WBVar00116621
WBVar00116585
WBVar00116609
WBVar00012817
WBVar00116615
WBVar00012802
WBVar00116603
WBVar00116610
WBVar00116604
WBVar00116580
WBVar00116616
WBVar00015804
WBVar00116586
WBVar00116598
WBVar00116592
WBVar00116622
RNASeq_FPKMWBls:00000020.188172From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
1.64576From_analysisRNASeq.briggsae.WBls:0000002.control_mean
2.27468From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
2.47442From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
0.627234From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
1.39113From_analysisRNASeq.briggsae.WBls:0000002.control_mean
1.45096From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000030.2259From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
1.14087From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
2.05585From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
1.19225From_analysisRNASeq.briggsae.WBls:0000003.control_mean
1.29499From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000412.8938From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
13.5857From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
14.2775From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
12.7532From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
14.245From_analysisRNASeq.briggsae.WBls:0000004.control_mean
14.838From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
16.4624From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.213497From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.399364From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
1.22147From_analysisRNASeq.briggsae.WBls:0000027.control_mean
3.05155From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
1.65586From_analysisRNASeq.briggsae.WBls:0000027.control_mean
1.67919From_analysisRNASeq.briggsae.WBls:0000027.control_median
2.95902From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000353.12677From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.35132From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
0.661147From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
1.09349From_analysisRNASeq.briggsae.WBls:0000038.control_median
1.22076From_analysisRNASeq.briggsae.WBls:0000038.control_mean
1.52583From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
2.34475From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:00000410.233177From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.264457From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.373965From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.483473From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.562984From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.27083From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
0.665555From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.687099From_analysisRNASeq.briggsae.WBls:0000041.control_mean
0.847637From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
1.02302From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630.232494From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0.293817From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.299353From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0.332119From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.37916From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.45577From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0.339256From_analysisRNASeq.briggsae.WBls:0000063.control_median
0.393536From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.700623From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001010.661147From_analysisRNASeq.briggsae.total_over_all_stages.control_median
2.21875From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
1.14692From_analysisRNASeq.briggsae.total_over_all_stages.control_median
3.04868From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
OrthologWBGene00018304Caenorhabditis elegansFrom_analysisOrthoMCL
Inparanoid_8
WormBase-Compara
WBGene00117735Pristionchus pacificusFrom_analysisOMA
WBGene00054171Caenorhabditis remaneiFrom_analysisOMA
Inparanoid_8
WBGene00155800Caenorhabditis brenneriFrom_analysisInparanoid_8
WBGene00190738Caenorhabditis brenneriFrom_analysisWormBase-Compara
CBOVI.g7832Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP26.g15519Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g1243Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g1245Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g17427Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g3967Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g1611Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g3112Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g17435Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g22132Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g25977Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g28849Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g3109Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g8468Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_10905.g22930Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_II.g5190Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g12065Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00300.g8988Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_13673Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_006343Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_006345Caenorhabditis remaneiFrom_analysisWormBase-Compara
Sp34_20270210Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrII_pilon.g4857Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00135243Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00216705Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00084774Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00289692Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00027029Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00027093Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00029573Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00032168Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00032203Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00032251Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00039108Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00042278Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00042473Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Kazal-type serine protease inhibitor domain; Kazal domain superfamily; Laminin-type EGF domain; EGF-like domain; Follistatin-like, N-terminal; Laminin EGF domain; and Kazal domain. Is an ortholog of C. elegans agr-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG11147a
CBG11147b
CBG11147c
Corresponding_CDS_historyCBG11147:bp219
CBG11147:bp255
Corresponding_transcriptCBG11147a.1
CBG11147b.1
CBG11147c.1
Other_sequenceEX535066.1
ACC06802_1
CBC13804_1
CJC06782_1
JI164391.1
JI459860.1
Dviv_isotig21274
Dviv_isotig25017
Experimental_infoExpr_patternExpr1065571
Microarray_resultsGPL8303_CB6_WBGene00032318_A
GPL8303_CB6_WBGene00032318_B
GPL14143_CBG11147_1546-1605_0.811_1_A
GPL14143_CBG11147_1617-1676_0.800_9_C
GPL14143_CBG11147_2427-2486_0.788_28_B
MethodGene