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WormBase Tree Display for Gene: WBGene00032203

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Name Class

WBGene00032203SMapS_parentSequencecb25.fpc2397
IdentityVersion2
NameCGC_nameCbr-lam-2From_analysisInferred_from_orthology
Sequence_nameCBG10982
Molecular_nameCBG10982
CBG10982.1
CBP08685
Other_nameCBG_10982Accession_evidenceNDBHE601482
Public_nameCbr-lam-2
DB_infoDatabaseNDBlocus_tagCBG_10982
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:01WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-lam-2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classlam
AlleleWBVar00116346
RNASeq_FPKMWBls:000000225.8105From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
29.7855From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
32.0918From_analysisRNASeq.briggsae.WBls:0000002.control_mean
40.6794From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
11.5736From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
26.9622From_analysisRNASeq.briggsae.WBls:0000002.control_mean
27.798From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:000000369.1376From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
77.2658From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
85.3941From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
57.1117From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
70.5478From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:0000004116.555From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
120.147From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
123.739From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
110.383From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
117.778From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
121.576From_analysisRNASeq.briggsae.WBls:0000004.control_mean
139.427From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:000002722.0493From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
35.2989From_analysisRNASeq.briggsae.WBls:0000027.control_mean
74.6217From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
9.2257From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
37.3058From_analysisRNASeq.briggsae.WBls:0000027.control_median
39.6147From_analysisRNASeq.briggsae.WBls:0000027.control_mean
52.5623From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003567.6423From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003837.898From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
46.7954From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
52.8294From_analysisRNASeq.briggsae.WBls:0000038.control_mean
55.0489From_analysisRNASeq.briggsae.WBls:0000038.control_median
63.3024From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
63.3219From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:000004116.6827From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
20.5197From_analysisRNASeq.briggsae.WBls:0000041.control_mean
21.0462From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
21.2644From_analysisRNASeq.briggsae.WBls:0000041.control_median
21.4825From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
22.8674From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
18.9254From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
20.71From_analysisRNASeq.briggsae.WBls:0000041.control_mean
23.256From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:000006313.7368From_analysisRNASeq.briggsae.WBls:0000063.control_mean
16.2503From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
16.9205From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
17.7532From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
17.7601From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
16.6925From_analysisRNASeq.briggsae.WBls:0000063.control_mean
17.3368From_analysisRNASeq.briggsae.WBls:0000063.control_median
31.4709From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010137.898From_analysisRNASeq.briggsae.total_over_all_stages.control_median
42.4474From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
39.2887From_analysisRNASeq.briggsae.total_over_all_stages.control_median
47.1964From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (37)
ParalogWBGene00027029Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00027093Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00029573Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00032168Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00032251Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00032318Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00039108Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00042278Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00042473Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Galactose-binding-like domain superfamily; Laminin, N-terminal; Laminin IV; Laminin-type EGF domain; EGF-like domain; Laminin EGF domain; Laminin N-terminal (Domain VI); and Laminin B (Domain IV). Is an ortholog of C. elegans lam-2. In C. elegans, lam-2 is involved in positive regulation of locomotion.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG10982
Corresponding_CDS_historyCBG10982:bp194
CBG10982:bp255
Corresponding_transcriptCBG10982.1
Other_sequence (25)
Experimental_infoExpr_patternExpr1051024
Microarray_resultsGPL8303_CB6_WBGene00032203_A
GPL8303_CB6_WBGene00032203_B
GPL8303_CB6_WBGene00032203_C
GPL8303_CB6_WBGene00032203_D
GPL8303_CB6_WBGene00032203_E
GPL14143_CBG10982_3119-3178_0.804_8_C
GPL14143_CBG10982_3949-4008_0.782_80_B
GPL14143_CBG10982_4197-4256_0.756_187_A
MethodGene