Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00032318

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00032318SMapS_parentSequencecb25.fpc2454a2
IdentityVersion2
NameCGC_nameCbr-agr-1From_analysisInferred_from_orthology
Sequence_nameCBG11147
Molecular_nameCBG11147a
CBG11147a.1
CBP41262
CBG11147b
CBP39136
CBG11147c
CBP46425
CBG11147b.1
CBG11147c.1
Other_nameCBG_11147Accession_evidenceNDBHE601002
Public_nameCbr-agr-1
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:01WBPerson1971EventImportedInitial conversion from brigace
215 Oct 2007 15:19:45WBPerson2970Name_changeCGC_nameCbr-agr-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classagr
Allele (54)
RNASeq_FPKMWBls:00000020.188172From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
1.64576From_analysisRNASeq.briggsae.WBls:0000002.control_mean
2.27468From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
2.47442From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
0.627234From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
1.39113From_analysisRNASeq.briggsae.WBls:0000002.control_mean
1.45096From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000030.2259From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
1.14087From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
2.05585From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
1.19225From_analysisRNASeq.briggsae.WBls:0000003.control_mean
1.29499From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000412.8938From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
13.5857From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
14.2775From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
12.7532From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
14.245From_analysisRNASeq.briggsae.WBls:0000004.control_mean
14.838From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
16.4624From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.213497From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.399364From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
1.22147From_analysisRNASeq.briggsae.WBls:0000027.control_mean
3.05155From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
1.65586From_analysisRNASeq.briggsae.WBls:0000027.control_mean
1.67919From_analysisRNASeq.briggsae.WBls:0000027.control_median
2.95902From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000353.12677From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.35132From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
0.661147From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
1.09349From_analysisRNASeq.briggsae.WBls:0000038.control_median
1.22076From_analysisRNASeq.briggsae.WBls:0000038.control_mean
1.52583From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
2.34475From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:00000410.233177From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.264457From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.373965From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.483473From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.562984From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.27083From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
0.665555From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.687099From_analysisRNASeq.briggsae.WBls:0000041.control_mean
0.847637From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
1.02302From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630.232494From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0.293817From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.299353From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0.332119From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.37916From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.45577From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0.339256From_analysisRNASeq.briggsae.WBls:0000063.control_median
0.393536From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.700623From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001010.661147From_analysisRNASeq.briggsae.total_over_all_stages.control_median
2.21875From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
1.14692From_analysisRNASeq.briggsae.total_over_all_stages.control_median
3.04868From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (32)
ParalogWBGene00027029Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00027093Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00029573Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00032168Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00032203Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00032251Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00039108Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00042278Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00042473Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Kazal-type serine protease inhibitor domain; Kazal domain superfamily; Laminin-type EGF domain; EGF-like domain; Follistatin-like, N-terminal; Laminin EGF domain; and Kazal domain. Is an ortholog of C. elegans agr-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG11147a
CBG11147b
CBG11147c
Corresponding_CDS_historyCBG11147:bp219
CBG11147:bp255
Corresponding_transcriptCBG11147a.1
CBG11147b.1
CBG11147c.1
Other_sequenceEX535066.1
ACC06802_1
CBC13804_1
CJC06782_1
JI164391.1
JI459860.1
Dviv_isotig21274
Dviv_isotig25017
Experimental_infoExpr_patternExpr1065571
Microarray_resultsGPL8303_CB6_WBGene00032318_A
GPL8303_CB6_WBGene00032318_B
GPL14143_CBG11147_1546-1605_0.811_1_A
GPL14143_CBG11147_1617-1676_0.800_9_C
GPL14143_CBG11147_2427-2486_0.788_28_B
MethodGene