WormBase Tree Display for Sequence: F17E5

F17E5 DNA: F17E5 30548
  SMap: S_child: Gene_child: WBGene00200930 28303 28158
        WBGene00198419 16176 16478
        WBGene00171381 15776 15796
        WBGene00201967 23184 23359
        WBGene00008924 3051 8329
        WBGene00002991 22834 8310
      CDS_child (156)
      Transcript: F17E5.3 15776 15796
        F17E5.4 16176 16478
        F17E5.5 28303 28158
        F17E5.6 23184 23359
        F17E5.1a.1 22834 8310
        F17E5.1b.1 14654 8311
        F17E5.2.1 3058 8327
        F17E5.2.2 3051 8329
      Nongenomic: yk213c8 8378 22794
      PCR_product: cenix:147-c4 10473 11658
        cenix:64-b11 4840 5574
        mv_CAA63314 8784 22817
        mv_CAA63315 8783 14653
        mv_F17E5.2 3210 7277
        sjj_F17E5.1 10003 11143
        sjj_F17E5.2 4742 5905
      Allele: WBVar01194519 21888 21888
        WBVar01835073 2243 2243
        WBVar00519556 18794 18794
        WBVar01571411 16623 16623
        WBVar01571412 17355 17355
        WBVar01194520 21946 21946
        WBVar00519557 19315 19315
        WBVar01835074 8151 8151
        WBVar01835075 9241 9241
        WBVar00519558 19418 19418
        WBVar01194521 22066 22066
        WBVar01571413 19627 19627
        WBVar01571414 19676 19676
        WBVar01194522 22100 22100
        WBVar00519559 19572 19572
        WBVar01835076 17027 17027
        WBVar01835077 22814 22814
        WBVar01571415 20114 20114
        WBVar00519560 19762 19762
        WBVar01194523 22113 22113
        WBVar01194524 22229 22229
        WBVar01835078 23784 23784
        WBVar01571416 20851 20851
        WBVar00519561 20006 20006
        WBVar00519562 20270 20270
        WBVar01835079 30304 30304
        WBVar01571417 21385 21385
        WBVar01194525 22430 22430
        WBVar00519563 21566 21566
        WBVar01194526 22652 22652
        WBVar01571418 22020 22020
        WBVar01571419 23753 23753
        WBVar00519564 22343 22343
        WBVar01194527 22677 22677
        WBVar01194528 22785 22785
        WBVar00519565 22408 22408
        WBVar01571420 25196 25196
        WBVar00261683 7473 7474
        WBVar00519566 23171 23171
        WBVar01194529 23178 23178
        WBVar01571421 26266 26266
        WBVar01194530 23380 23380
        WBVar00519567 24441 24441
        WBVar01571422 26659 26659
        WBVar01194531 23423 23423
        WBVar01571423 27311 27311
        WBVar00519568 25279 25279
        WBVar01194532 23598 23598
        WBVar00519569 25706 25706
        WBVar01571424 28037 28037
        WBVar01571425 28048 28048
        WBVar00519570 27425 27425
        WBVar01194533 23767 23767
        WBVar01194534 24305 24305
        WBVar00519571 27661 27661
        WBVar01571426 28134 28134
        WBVar00259480 16569 16570
        WBVar01571427 28851 28851
        WBVar01471609 4469 4469
        WBVar01194535 24482 24482
        WBVar00519572 27981 27981
        WBVar01194536 24521 24521
        WBVar01471610 4612 4612
        WBVar00519573 28368 28368
        WBVar01571428 28897 28897
        WBVar01571429 29113 29113
        WBVar00519574 28385 28385
        WBVar01194537 24731 24731
        WBVar01471611 5086 5086
        WBVar01471612 6024 6024
        WBVar01571430 29623 29623
        WBVar00519575 28491 28491
        WBVar01194538 24735 24735
        WBVar01471614 6368 6368
        WBVar02088414 25307 25319
        WBVar00519576 28647 28647
        WBVar01194539 24737 24737
        WBVar01194540 25286 25286
        WBVar01825985 16760 16760
        WBVar01471615 10820 10820
        WBVar01490336 684 684
        WBVar00519577 28685 28685
        WBVar00519578 28774 28774
        WBVar01490337 20837 20837
        WBVar01194541 25289 25289
        WBVar01471616 13055 13055
        WBVar01471617 13167 13167
        WBVar01954678 303 304
        WBVar01194542 25438 25438
        WBVar00519579 29154 29154
        WBVar00519580 29393 29393
        WBVar01954679 3284 3288
        WBVar01194543 25524 25524
        WBVar01471618 26834 26834
        WBVar01889196 13734 13734
        WBVar01954680 3470 3470
        WBVar01471619 26863 26863
        WBVar00519581 29467 29467
        WBVar01889197 29069 29069
        WBVar01194544 25675 25675
        WBVar01194545 25920 25920
        WBVar01471620 26890 26890
        WBVar01954681 3816 3817
        WBVar00519582 29952 29952
        WBVar01471621 28275 28275
        WBVar00519583 30050 30050
        WBVar01954682 4012 4013
        WBVar01194546 25979 25979
        WBVar01897949 11247 11247
        WBVar00519584 30110 30110
        WBVar01954683 8026 8027
        WBVar01194547 26009 26009
        WBVar01954684 12097 12097
        WBVar00519585 30467 30467
        WBVar01194548 26461 26461
        WBVar01194549 27132 27132
        WBVar01954685 16168 16169
        WBVar01194550 27352 27352
        WBVar01954686 22082 22083
        WBVar01194551 27589 27589
        WBVar01954687 22874 22875
        WBVar02078283 20449 20561
        WBVar01194552 27876 27876
        WBVar01954688 23809 23809
        WBVar02078284 27712 28713
        WBVar01954689 24614 24614
        WBVar00274559 13488 13488
        WBVar01194553 27993 27993
        WBVar01849578 26601 26601
        WBVar01954690 25694 25694
        WBVar00274560 15847 15847
        WBVar01194554 28128 28128
        WBVar01954691 26583 26583
        WBVar01194555 28208 28208
        WBVar00274561 25703 25704
        WBVar01954692 28501 28501
        WBVar01194556 28231 28231
        WBVar01194557 28234 28234
        WBVar01954693 28958 28958
        WBVar01954694 29068 29069
        WBVar01194558 28312 28312
        WBVar01194559 28365 28365
        WBVar01194560 28450 28450
        WBVar01194561 28704 28704
        WBVar01194562 28774 28774
        WBVar01194563 29394 29394
        WBVar01194564 29407 29407
        WBVar01194381 74 74
        WBVar01194565 29612 29612
        WBVar01194382 95 95
        WBVar01194566 29787 29787
        WBVar01194383 614 614
        WBVar01194567 30040 30040
        WBVar01194568 30062 30062
        WBVar01194384 842 842
        WBVar01194569 30141 30141
        WBVar01194385 1580 1580
        WBVar01194386 1663 1663
        WBVar01194570 30295 30295
        WBVar01194571 30319 30319
        WBVar01194387 1814 1814
        WBVar02027477 12096 12097
        WBVar01194388 1999 1999
        WBVar01194389 2234 2234
        WBVar01194390 2336 2336
        WBVar01194391 2447 2447
        WBVar01981433 12129 12129
        WBVar01981434 13485 13485
        WBVar01194392 2517 2517
        WBVar01194393 2894 2894
        WBVar01981435 15840 15840
        WBVar01981436 23798 23798
        WBVar01194394 2976 2976
        WBVar01194395 3271 3271
        WBVar01981437 25694 25695
        WBVar01194396 3499 3499
        WBVar01981438 27505 27506
        WBVar01194397 3754 3754
        WBVar01981439 28957 28958
        WBVar01621638 304 304
        WBVar01621639 1535 1535
        WBVar01981440 30367 30367
        WBVar01194398 4580 4580
        WBVar01194399 4767 4767
        WBVar01621640 4692 4692
        WBVar01621641 8207 8207
        WBVar01194400 4973 4973
        WBVar00599192 11554 11554
        WBVar00599193 11554 11554
        WBVar01621642 19043 19043
        WBVar01194401 5136 5136
        WBVar01787131 3679 3679
        WBVar01194402 5290 5290
        WBVar01621643 21458 21458
        WBVar01621644 25345 25345
        WBVar00083532 254 254
        WBVar01787132 4317 4317
        WBVar01194403 5832 5832
        WBVar01194404 5991 5991
        WBVar00083533 1989 1989
        WBVar01787133 5524 5524
        WBVar01621645 26104 26104
        WBVar00083534 3249 3249
        WBVar01787134 5830 5830
        WBVar00253828 27964 27965
        WBVar01194405 6360 6360
        WBVar00083535 5815 5815
        WBVar01194406 6491 6491
        WBVar01602262 27512 27512
        WBVar01787135 5832 5832
        WBVar01602263 30368 30368
        WBVar01194407 6495 6495
        WBVar00083536 6106 6106
        WBVar01787136 5840 5840
        WBVar01194408 6618 6618
        WBVar00263954 4085 4086
        WBVar00083537 6626 6626
        WBVar01787137 7110 7110
        WBVar01787138 7396 7396
        WBVar02078884 27771 28416
        WBVar01194409 6633 6633
        WBVar00083538 6833 6833
        WBVar00083539 7111 7111
        WBVar01194410 6760 6760
        WBVar01787139 7542 7542
        WBVar00083540 8859 8859
        WBVar01787140 7741 7741
        WBVar01194411 6819 6819
        WBVar01787141 8526 8526
        WBVar01487816 28957 28958
        WBVar00083541 11236 11236
        WBVar01194412 6857 6857
        WBVar00603616 18850 18850
        WBVar01487817 28957 28958
        WBVar01194413 6899 6899
        WBVar01787142 9475 9475
        WBVar02045250 20573 20574
        WBVar00083542 11676 11676
        WBVar01787143 10417 10417
        WBVar02045251 28199 28203
        WBVar00083543 15855 15855
        WBVar01194414 7248 7248
        WBVar02045252 28394 28395
        WBVar01194415 7351 7351
        WBVar00083544 16972 16972
        WBVar01787144 11387 11387
        WBVar01194416 7568 7568
        WBVar00083545 22284 22284
        WBVar01787145 12043 12043
        WBVar00083546 22471 22471
        WBVar01787146 12120 12120
        WBVar01194417 8232 8232
        WBVar00083547 22997 22997
        WBVar01194418 8253 8253
        WBVar01787147 12142 12142
        WBVar01914265 9084 9084
        WBVar01787148 12537 12537
        WBVar00083548 25338 25338
        WBVar01194419 8338 8338
        WBVar01787149 12818 12818
        WBVar01194420 8523 8523
        WBVar01914266 23808 23808
        WBVar00083549 26110 26110
        WBVar00083550 28397 28397
        WBVar01787150 13236 13236
        WBVar01194421 8654 8654
        WBVar01787151 13981 13981
        WBVar01194422 8808 8808
        WBVar00083551 29555 29555
        WBVar01194423 8893 8893
        WBVar01787152 14510 14510
        WBVar00083552 30367 30367
        WBVar01194424 8939 8939
        WBVar01787153 15121 15121
        WBVar01194425 8958 8958
        WBVar01787154 15440 15440
        WBVar01194426 8983 8983
        WBVar01787155 15700 15700
        WBVar01194427 9118 9118
        WBVar01787156 15946 15946
        WBVar01194428 9124 9124
        WBVar01787157 18558 18558
        WBVar01194429 9152 9152
        WBVar01787158 19358 19358
        WBVar01194430 9158 9158
        WBVar01787159 20170 20170
        WBVar01194431 9359 9359
        WBVar01787160 20861 20861
        WBVar01787161 22864 22864
        WBVar01194432 9785 9785
        WBVar01194433 10212 10212
        WBVar01787162 22923 22923
        WBVar01787163 23460 23460
        WBVar01194434 10234 10234
        WBVar01690866 2808 2808
        WBVar01194435 10373 10373
        WBVar01787164 25707 25707
        WBVar01194436 10959 10959
        WBVar01690867 7870 7870
        WBVar01787165 26594 26594
        WBVar01787166 26806 26806
        WBVar01690868 22992 22992
        WBVar01194437 11027 11027
        WBVar01787167 29092 29092
        WBVar01194438 11177 11177
        WBVar01690869 26604 26604
        WBVar01194439 11274 11274
        WBVar01787168 29214 29214
        WBVar01194440 11554 11554
        WBVar01194441 11554 11554
        WBVar01639789 2527 2527
        WBVar01194442 11554 11554
        WBVar02140263 3269 3269
        WBVar01194443 11554 11554
        WBVar01194444 11942 11942
        WBVar00260862 7964 7965
        WBVar02140264 10449 10449
        WBVar01194445 12304 12304
        WBVar01987977 18998 18999
        WBVar01194446 12305 12305
        WBVar01987978 22874 22875
        WBVar01194447 12500 12500
        WBVar01987979 26993 27000
        WBVar01194448 12688 12688
        WBVar01987980 28396 28397
        WBVar01987981 28762 28762
        WBVar01194449 12717 12717
        WBVar00069459 2183 2184
        WBVar01194450 12725 12725
        WBVar01987982 30364 30364
        WBVar01194451 12896 12896
        WBVar01194452 12952 12952
        WBVar01759647 2285 2285
        WBVar01194453 12961 12961
        WBVar01194454 13033 13033
        WBVar01194455 13103 13103
        WBVar01194456 13110 13110
        WBVar01194457 13128 13128
        WBVar01194458 13478 13478
        WBVar01194459 13480 13480
        WBVar01194460 13533 13533
        WBVar01194461 13769 13769
        WBVar00244279 10585 10589
        WBVar01194462 14070 14070
        WBVar00244280 13770 13770
        WBVar01194463 14084 14084
        WBVar01194464 14217 14217
        WBVar00244282 16187 16188
        WBVar01194465 14290 14290
        WBVar01194466 14306 14306
        WBVar02119809 12105 12129
        WBVar01194467 14358 14358
        WBVar01194468 14387 14387
        WBVar01194469 14541 14541
        WBVar01194470 14651 14651
        WBVar01194471 14667 14667
        WBVar01194472 14669 14669
        WBVar00256659 27623 27624
        WBVar01194473 14821 14821
        WBVar01194474 14899 14899
        WBVar01194475 14974 14974
        WBVar01194476 15297 15297
        WBVar01816883 2533 2533
        WBVar01816884 3996 3996
        WBVar01194477 15564 15564
        WBVar01194478 15640 15640
        WBVar01816885 7455 7455
        WBVar01194479 15795 15795
        WBVar01816886 12504 12504
        WBVar00519516 557 557
        WBVar01194480 16368 16368
        WBVar01816887 22099 22099
        WBVar00519517 1223 1223
        WBVar00519518 1282 1282
        WBVar01194481 16439 16439
        WBVar01816888 23345 23345
        WBVar00519519 1747 1747
        WBVar01194482 16564 16564
        WBVar00519520 1935 1935
        WBVar01194483 16704 16704
        WBVar01194484 16785 16785
        WBVar00519521 2741 2741
        WBVar00519522 2836 2836
        WBVar01194485 16969 16969
        WBVar01194486 17021 17021
        WBVar00519523 3025 3025
        WBVar01194487 17263 17263
        WBVar00519524 3245 3245
        WBVar01194488 17278 17278
        WBVar00519525 3529 3529
        WBVar02034758 12138 12139
        WBVar01194489 17369 17369
        WBVar00519526 3717 3717
        WBVar00519527 4251 4251
        WBVar01194490 17669 17669
        WBVar02034759 15442 15443
        WBVar01194491 17751 17751
        WBVar02034760 17427 17427
        WBVar00519528 5644 5644
        WBVar00519529 6410 6410
        WBVar02034761 22083 22083
        WBVar01194492 17873 17873
        WBVar00519530 6513 6513
        WBVar01194493 18211 18211
        WBVar02034762 24666 24674
        WBVar01194494 18414 18414
        WBVar00307279 23007 23007
        WBVar00519531 7274 7274
        WBVar02034763 25704 25706
        WBVar01194495 18874 18874
        WBVar00519532 7637 7637
        WBVar02034764 25878 25879
        WBVar02034765 26155 26155
        WBVar00519533 7766 7766
        WBVar01194496 18898 18898
        WBVar01194497 18917 18917
        WBVar00519534 7868 7868
        WBVar01194498 18982 18982
        WBVar00519535 8303 8303
        WBVar00519536 8930 8930
        WBVar01194499 19154 19154
        WBVar02148023 10181 10312
        WBVar01194500 19440 19440
        WBVar00519537 11321 11321
        WBVar01194501 19443 19443
        WBVar00519538 11554 11554
        WBVar01194502 20005 20005
        WBVar00519539 11634 11634
        WBVar01194503 20042 20042
        WBVar00519540 11714 11714
        WBVar00519541 12112 12112
        WBVar01194504 20108 20108
        WBVar00519542 14106 14106
        WBVar01194505 20289 20289
        WBVar00519543 14546 14546
        WBVar01194506 20317 20317
        WBVar00519544 14614 14614
        WBVar01194507 20365 20365
        WBVar01782588 464 464
        WBVar01194508 20662 20662
        WBVar01571400 122 122
        WBVar00519545 14669 14669
        WBVar00519546 15587 15587
        WBVar01571401 1065 1065
        WBVar01194509 21148 21148
        WBVar01194510 21283 21283
        WBVar00519547 16029 16029
        WBVar01571402 2615 2615
        WBVar01571403 6596 6596
        WBVar00519548 16224 16224
        WBVar01194511 21325 21325
        WBVar01571404 7475 7475
        WBVar01194512 21345 21345
        WBVar00519549 16243 16243
        WBVar01194513 21367 21367
        WBVar01571405 9524 9524
        WBVar00519550 16474 16474
        WBVar00519551 16688 16688
        WBVar01571406 11853 11853
        WBVar01194514 21392 21392
        WBVar02009252 21988 21989
        WBVar01194515 21665 21665
        WBVar00519552 17134 17134
        WBVar01571407 12307 12307
        WBVar01571408 14509 14509
        WBVar00519553 17170 17170
        WBVar01194516 21724 21724
        WBVar01194517 21768 21768
        WBVar00519554 17720 17720
        WBVar01571409 14586 14586
        WBVar01571410 15272 15272
        WBVar00519555 18315 18315
        WBVar01194518 21824 21824
      Oligo_set: Aff_F17E5.1A 10235 8781
        Aff_F17E5.2 6436 7279
      Feature_object (182)
      Feature_data: F17E5:Polysome 1 30548
        F17E5:TranscriptionallyActiveRegion 1 30548
        F17E5:ChIPSeqTF 1 30548
        F17E5:TRF 1 30548
        F17E5:Dust 1 30548
        F17E5:inverted 1 30548
      Homol_data (20)
  Structure: From: Source: CHROMOSOME_X
    Overlap_right: T24D3 30449
    Overlap_left: F19H6
    Clone_left_end: F17E5 1
      T24D3 30449
    Clone_right_end: F19H6 11506
  DB_info: Database: EMBL NDB_AC Z50873
        NDB_SV Z50873.2
    DB_remark: [121025] Sequence correction WBsf268060 : Deletion C-1 bases @ 25534
    Keyword: HTG
    EMBL_dump_info: EMBL_dump_method: worm_EMBL-dump
  Origin: From_author: McMurray AA
    From_laboratory: HX
    Date_directory: 950327
    Species: Caenorhabditis elegans
    Strain: WBStrain00000001
  Visible: Clone: F17E5
  Properties: Genomic_canonical
    Checksum: MD5: f70de5ef58d0a1c87b50810148445748
    Status (3)
  Map: Sequence-X Ends: Left: 6691
        Right: 6708
  Interpolated_map_position: X 7.04052
  Assembly_tags: Clone left end 1 4 left hand end of F17E5
      30449 30452 left hand end of T24D3
    Clone right end 11503 11506 right hand end of F19H6
          End of F19H6
    annotation 22932 22980 Bases 22932 to 22980 (48bp) not d.s. but region covered by terminators
      22997 23024 Walks leading into run of G's (looks like 17 G's) have ambiguous data over bases 22997 to 23007 but base counting looks correct
      23052 23096 Bases 23052 to 23096 (44bp) not d.s. but data confirmed with terminators
  Method: Genomic_canonical