WormBase Tree Display for Expression_cluster: WBPaper00061527:nrde-3-tra-4_10484

WBPaper00061527:nrde-3-tra-4_10484 Description: Coexpression clique No. 97, nrde-3-tra-4_10484, on the genome-wide coexpression clique map for the nematode GPL200 platform.
  Species: Caenorhabditis elegans
  Algorithm: All available microarray datasets for the GPL200 platform (Affymetrix C. elegans Genome Array) were obtained from the GEO repository. This included 2243 individual microarray experiments. These were normalized against each other with the software RMAexpress (Bolstad, 2014). Based on these normalized values, Pearsons correlation coefficients were obtained for each probe-probe pair of the 22,620 probes represented on this array type. The resulting list of correlation coefficients was then ranked to generate the ranked coexpression database with information on each probe represented on the GPL200 platform.
  Reference: WBPaper00061527
  Based_on_WB_Release
  Gene: WBGene00013632
    WBGene00006369
    WBGene00000464
    WBGene00010572
    WBGene00017178
    WBGene00022502
    WBGene00007846
    WBGene00018735
    WBGene00004769
    WBGene00012723
    WBGene00009951
    WBGene00010199
    WBGene00019864
    WBGene00006384
    WBGene00010550
    WBGene00006785
    WBGene00015324
    WBGene00006393
    WBGene00002031
    WBGene00004893
    WBGene00021278
    WBGene00019729
    WBGene00001425
    WBGene00020633
    WBGene00016937
    WBGene00001583
    WBGene00015429
    WBGene00015171
    WBGene00018518
    WBGene00009823
    WBGene00019924
    WBGene00006517
    WBGene00021474
    WBGene00015132
    WBGene00022769
    WBGene00006368
    WBGene00000884
    WBGene00008085
    WBGene00021324
    WBGene00019554
    WBGene00019862
    WBGene00010433
    WBGene00004745
    WBGene00001949
    WBGene00004400
    WBGene00016710
    WBGene00020508
    WBGene00009025
    WBGene00019959
    WBGene00017046
    WBGene00000289
    WBGene00006862
    WBGene00004272
    WBGene00004350
    WBGene00023498
    WBGene00004126
    WBGene00000137
    WBGene00001080
    WBGene00018238
    WBGene00014080
    WBGene00003979
    WBGene00011418
    WBGene00023404
    WBGene00011956
    WBGene00009461
    WBGene00002220
    WBGene00002029
    WBGene00004786
    WBGene00009977
    WBGene00018740
    WBGene00006773
    WBGene00006816
    WBGene00008586
    WBGene00006843
    WBGene00003394
    WBGene00000383
    WBGene00015518
    WBGene00003911
    WBGene00006805
    WBGene00007906
    WBGene00003965
    WBGene00015800
    WBGene00017908
    WBGene00016643
    WBGene00004089
  Attribute_of: Microarray_experiment
  Associated_with: GO_term: GO:0007399
  Remark: Type: Co-expression Cluster