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WormBase Tree Display for Expression_cluster: WBPaper00061527:cids-2_2203-attf-2_2451

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Name Class

WBPaper00061527:cids-2_2203-attf-2_2451DescriptionCoexpression clique No. 295, cids-2_2203-attf-2_2451, on the genome-wide coexpression clique map for the nematode GPL200 platform.
SpeciesCaenorhabditis elegans
AlgorithmAll available microarray datasets for the GPL200 platform (Affymetrix C. elegans Genome Array) were obtained from the GEO repository. This included 2243 individual microarray experiments. These were normalized against each other with the software RMAexpress (Bolstad, 2014). Based on these normalized values, Pearsons correlation coefficients were obtained for each probe-probe pair of the 22,620 probes represented on this array type. The resulting list of correlation coefficients was then ranked to generate the ranked coexpression database with information on each probe represented on the GPL200 platform.
ReferenceWBPaper00061527
Based_on_WB_Release
GeneWBGene00012528
WBGene00014096
WBGene00000192
WBGene00018294
WBGene00020246
WBGene00008948
WBGene00010990
WBGene00011735
WBGene00009050
WBGene00007433
WBGene00019877
WBGene00002185
WBGene00019465
WBGene00022268
WBGene00004698
WBGene00021906
WBGene00012468
WBGene00006595
WBGene00022280
WBGene00018847
WBGene00001860
WBGene00008878
WBGene00009974
WBGene00008441
WBGene00013140
WBGene00004782
WBGene00013223
WBGene00002078
WBGene00006941
WBGene00009440
WBGene00006739
WBGene00002027
WBGene00003034
WBGene00004700
WBGene00012643
WBGene00012489
WBGene00014098
WBGene00001320
WBGene00016115
WBGene00019947
WBGene00013994
WBGene00004732
WBGene00004915
WBGene00003793
WBGene00011885
WBGene00001165
WBGene00022401
WBGene00010369
WBGene00016408
WBGene00022152
WBGene00004132
WBGene00003036
WBGene00009584
WBGene00006577
WBGene00001230
WBGene00019259
WBGene00020762
WBGene00000419
WBGene00020827
WBGene00019399
WBGene00020915
WBGene00044077
WBGene00007514
WBGene00016118
WBGene00004319
WBGene00006529
WBGene00010615
WBGene00000475
WBGene00022749
WBGene00009460
WBGene00004743
WBGene00005663
WBGene00017088
WBGene00000911
WBGene00011912
WBGene00000509
WBGene00011111
WBGene00004046
WBGene00002998
WBGene00001999
WBGene00012897
WBGene00006931
WBGene00015091
WBGene00020629
WBGene00000591
WBGene00000106
WBGene00000377
WBGene00006794
WBGene00009012
WBGene00006721
WBGene00017967
WBGene00001229
WBGene00017317
WBGene00004759
WBGene00007090
WBGene00077771
WBGene00045383
WBGene00000883
WBGene00000293
WBGene00002981
WBGene00008800
WBGene00000459
WBGene00002201
WBGene00018090
WBGene00018953
WBGene00006773
WBGene00009451
WBGene00001259
WBGene00003002
WBGene00015687
WBGene00004701
WBGene00004204
WBGene00004060
WBGene00006523
WBGene00001840
WBGene00006352
WBGene00019124
WBGene00003218
WBGene00001971
WBGene00000380
WBGene00002045
WBGene00004699
WBGene00015927
WBGene00018008
WBGene00009580
WBGene00019162
WBGene00003476
WBGene00006460
WBGene00010097
WBGene00003815
WBGene00012714
WBGene00010882
WBGene00001978
WBGene00016384
WBGene00000379
WBGene00006994
WBGene00004304
WBGene00021636
WBGene00010260
WBGene00019220
WBGene00015330
WBGene00002000
WBGene00010736
WBGene00003185
WBGene00017435
WBGene00004138
WBGene00009920
WBGene00000187
WBGene00001186
WBGene00000795
WBGene00001748
WBGene00010279
WBGene00003904
WBGene00000292
WBGene00015943
WBGene00012982
WBGene00004105
WBGene00003196
WBGene00006720
WBGene00001972
WBGene00010428
WBGene00001340
WBGene00017349
WBGene00003827
Attribute_ofMicroarray_experiment
Associated_withGO_termGO:0005622
RemarkType: Co-expression Cluster