WormBase Tree Display for Gene: WBGene00001072

WBGene00001072 SMap: S_parent: Sequence: T14B4
  Identity: Version: 2
    Name: CGC_name: dpy-10 Person_evidence: WBPerson261
      Sequence_name: T14B4.7
      Molecular_name: T14B4.7
        T14B4.7.1
        CE51880
      Other_name: rol-7
        CELE_T14B4.7 Accession_evidence: NDB BX284602
      Public_name: dpy-10
    DB_info: Database: AceView gene 2H0
        WormQTL gene WBGene00001072
        WormFlux gene WBGene00001072
        NDB locus_tag CELE_T14B4.7
        Panther gene CAEEL|WormBase=WBGene00001072|UniProtKB=P35800
          family PTHR24637
        NCBI gene 36805042
        RefSeq protein NM_001348636.5
        SwissProt UniProtAcc P35800
        UniProt_GCRP UniProtAcc P35800
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:22 WBPerson1971 Event: Imported: Initial conversion from geneace
        2 06 Mar 2018 14:35:46 WBPerson4025 Event: Split_into: WBGene00302993
      Split_into: WBGene00302993
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: dpy
    Reference_allele: WBVar00142982
    Allele (51)
    Possibly_affected_by: WBVar02152815
      WBVar02152872
      WBVar02157712
      WBVar02158431
      WBVar02158465
      WBVar02158466
      WBVar02158831
    Legacy_information: e128 : small dumpy (non-roller); sometimes poor freezing. ES3 (all stages) ME1. NA > 10 (e223 sc48 (left roller dumpy) sc30ts (left roller dumpy at 25x) sc? (pka rol-7) etc.).
      [C.elegansII] e128 : small dumpy (non-roller); sometimes poor survival from freezing; non-null. Suppresses some alleles of glp-1, emb-5.ES3 (all stages) ME1. OA>10: e223, sc48 (left roller dumpy), sc30ts (pka rol-7, left roller dumpy at 25C),cn64 (dominant left roller), q291, s364fdi etc.Cloned: encodes collagen 41% identical to DPY-2. e128 is splicing defect, cg36 (left roller dumpy, ochre, probable null). [Brenner 1974; Levy et al. 1993; CH]
    Strain: WBStrain00022186
      WBStrain00022251
      WBStrain00022473
      WBStrain00022528
      WBStrain00022533
      WBStrain00022548
      WBStrain00022614
      WBStrain00022577
      WBStrain00022612
      WBStrain00022615
      WBStrain00022623
      WBStrain00022625
      WBStrain00022628
      WBStrain00022640
      WBStrain00022681
      WBStrain00022687
      WBStrain00022735
      WBStrain00022736
      WBStrain00022754
      WBStrain00023450
      WBStrain00023451
      WBStrain00023538
      WBStrain00023539
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      WBStrain00023541
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      WBStrain00023559
      WBStrain00023560
      WBStrain00023561
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      WBStrain00023573
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      WBStrain00024030
      WBStrain00024079
      WBStrain00024097
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      WBStrain00024112
      WBStrain00026486
      WBStrain00026565
      WBStrain00026566
      WBStrain00026571
      WBStrain00026572
      WBStrain00026584
      WBStrain00026740
      WBStrain00026870
      WBStrain00026892
      WBStrain00027055
      WBStrain00027125
      WBStrain00027127
      WBStrain00027191
      WBStrain00027192
      WBStrain00027235
      WBStrain00027290
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      WBStrain00027316
      WBStrain00027357
      WBStrain00027370
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      WBStrain00027468
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      WBStrain00027610
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      WBStrain00028756
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      WBStrain00030682
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      WBStrain00035500
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      WBStrain00035995
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      WBStrain00036014
      WBStrain00036023
      WBStrain00036057
      WBStrain00036059
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      WBStrain00036118
      WBStrain00036127
      WBStrain00036152
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      WBStrain00036192
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      WBStrain00036223
      WBStrain00036247
      WBStrain00036251
      WBStrain00036264
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      WBStrain00036276
      WBStrain00036279
      WBStrain00036309
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      WBStrain00036333
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      WBStrain00036343
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      WBStrain00036374
      WBStrain00036378
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      WBStrain00036388
      WBStrain00036412
      WBStrain00036429
      WBStrain00036441
      WBStrain00036447
      WBStrain00036457
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      WBStrain00036493
      WBStrain00036519
      WBStrain00036522
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      WBStrain00036531
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      WBStrain00036597
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      WBStrain00036756
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      WBStrain00036909
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      WBStrain00037251
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      WBStrain00037405
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      WBStrain00037563
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      WBStrain00037580
      WBStrain00037602
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      WBStrain00037633
      WBStrain00037647
      WBStrain00037682
      WBStrain00037695
      WBStrain00037699
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      WBStrain00037710
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      WBStrain00037771
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      WBStrain00040206
      WBStrain00040211
      WBStrain00040212
      WBStrain00040280
      WBStrain00040455
      WBStrain00040522
      WBStrain00040713
      WBStrain00040714
      WBStrain00040715
      WBStrain00040729
      WBStrain00000053
      WBStrain00000066
      WBStrain00000074
      WBStrain00000197
      WBStrain00000291
      WBStrain00003815
      WBStrain00003816
      WBStrain00003833
      WBStrain00003837
      WBStrain00003839
      WBStrain00003840
      WBStrain00003841
      WBStrain00003885
      WBStrain00003886
      WBStrain00003944
      WBStrain00003947
      WBStrain00004107
      WBStrain00004396
      WBStrain00004398
      WBStrain00004403
      WBStrain00004404
      WBStrain00004405
      WBStrain00004430
      WBStrain00004432
      WBStrain00004473
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      WBStrain00004949
      WBStrain00004974
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      WBStrain00004976
      WBStrain00004979
      WBStrain00004984
      WBStrain00004995
      WBStrain00004996
      WBStrain00004998
      WBStrain00005339
      WBStrain00005515
      WBStrain00005659
      WBStrain00005660
      WBStrain00005883
      WBStrain00006125
      WBStrain00006184
      WBStrain00006359
      WBStrain00006384
      WBStrain00006386
      WBStrain00006389
      WBStrain00006390
      WBStrain00006392
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      WBStrain00006398
      WBStrain00006259
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      WBStrain00006437
      WBStrain00006443
      WBStrain00006445
      WBStrain00007163
      WBStrain00007171
      WBStrain00007272
      WBStrain00007654
      WBStrain00007707
      WBStrain00007736
      WBStrain00007892
      WBStrain00007894
      WBStrain00007989
      WBStrain00007991
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      WBStrain00008005
      WBStrain00008006
      WBStrain00008009
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      WBStrain00008501
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      WBStrain00008508
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      WBStrain00008611
      WBStrain00005410
      WBStrain00005368
      WBStrain00037822
      WBStrain00040305
      WBStrain00040285
      WBStrain00022166
      WBStrain00028635
      WBStrain00028633
      WBStrain00000297
      WBStrain00000298
      WBStrain00022639
      WBStrain00033311
      WBStrain00037795
      WBStrain00047453
      WBStrain00047649
      WBStrain00047486
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      WBStrain00047485
      WBStrain00047488
      WBStrain00047472
      WBStrain00047448
      WBStrain00047450
      WBStrain00047483
      WBStrain00049518
      WBStrain00049519
      WBStrain00049812
      WBStrain00049429
      WBStrain00049410
      WBStrain00049413
      WBStrain00051042
      WBStrain00051004
      WBStrain00049397
      WBStrain00049381
      WBStrain00049403
      WBStrain00049342
      WBStrain00049387
      WBStrain00049355
      WBStrain00049375
      WBStrain00049386
      WBStrain00049409
      WBStrain00049337
      WBStrain00049420
      WBStrain00049374
      WBStrain00049365
      WBStrain00049383
      WBStrain00037440
      WBStrain00049358
      WBStrain00049356
      WBStrain00049345
      WBStrain00049416
      WBStrain00049333
      WBStrain00049367
      WBStrain00049417
      WBStrain00049364
      WBStrain00049385
      WBStrain00049393
      WBStrain00049437
      WBStrain00049394
      WBStrain00049419
      WBStrain00036867
      WBStrain00049471
      WBStrain00051905
      WBStrain00051632
      WBStrain00051912
      WBStrain00051910
      WBStrain00051911
      WBStrain00051900
      WBStrain00051929
      WBStrain00051888
      WBStrain00051887
      WBStrain00051906
      WBStrain00051889
      WBStrain00051928
      WBStrain00051909
      WBStrain00049456
      WBStrain00051902
      WBStrain00051907
      WBStrain00051926
      WBStrain00051903
      WBStrain00051927
      WBStrain00049463
      WBStrain00051877
      WBStrain00051904
      WBStrain00051901
      WBStrain00051930
      WBStrain00051908
      WBStrain00051899
      WBStrain00051563
      WBStrain00051759
      WBStrain00055531
      WBStrain00055418
      WBStrain00055411
      WBStrain00055081
      WBStrain00055421
      WBStrain00055447
      WBStrain00055066
      WBStrain00055432
      WBStrain00055409
      WBStrain00054676
      WBStrain00055518
      WBStrain00054967
      WBStrain00049380
      WBStrain00055530
      WBStrain00054738
      WBStrain00055523
      WBStrain00055426
      WBStrain00055533
      WBStrain00055469
      WBStrain00055425
      WBStrain00055519
      WBStrain00055522
      WBStrain00055417
      WBStrain00055534
      WBStrain00055535
      WBStrain00055412
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      WBStrain00055532
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      WBStrain00055524
      WBStrain00055465
      WBStrain00055438
    RNASeq_FPKM (74)
    GO_annotation (12)
    Contained_in_operon: CEOP5607
    Ortholog (22)
    Paralog (161)
    Structured_description: Concise_description: A cuticle collagen protein that afffects body morphology and movement and genetically interacts with the sqt-1 collagen gene. Paper_evidence: WBPaper00001792
          Curator_confirmed: WBPerson324
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to be a structural constituent of collagen and cuticulin-based cuticle. Involved in several processes, including cuticle development involved in collagen and cuticulin-based cuticle molting cycle; locomotion; and post-embryonic body morphogenesis. Predicted to be part of collagen trimer. Used to study skin disease. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Experimental_model: DOID:37 Homo sapiens Paper_evidence: WBPaper00061220
          Curator_confirmed: WBPerson324
          Date_last_updated: 02 May 2022 00:00:00
  Models_disease_asserted: WBDOannot00001178
  Molecular_info: Corresponding_CDS: T14B4.7
    Corresponding_CDS_history: T14B4.7:wp86
      T14B4.7a:wp257
      T14B4.7a:wp264
      T14B4.7b:wp97
      T14B4.7b:wp257
      T14B4.7c:wp264
    Corresponding_transcript: T14B4.7.1
    Corresponding_transcript_history: T14B4.7b:wp264
    Other_sequence: MHC07417_1
      MH05682
      PPC08679_1
    Associated_feature: WBsf650168
      WBsf650169
      WBsf665638
      WBsf223225
  Experimental_info: RNAi_result (35)
    Expr_pattern: Expr1022469
      Expr1030680
      Expr1156899
      Expr2011055
      Expr2029292
    Drives_construct: WBCnstr00037099
    Construct_product: WBCnstr00037099
    Regulate_expr_cluster: WBPaper00035873:dpy-10_regulated
    Microarray_results (26)
    Expression_cluster (274)
    Interaction (195)
    WBProcess: WBbiopr:00000124
  Map_info: Map: II Position: 0
    Well_ordered
    Positive: Inside_rearr: mnDf40
        mC6
      Positive_clone: T14B4 Inferred_automatically: From sequence, transcript, pseudogene data
        ZK857
    Mapping_data: 2_point: 34
        35
        37
        40
        41
        42
        43
        44
        45
        46
        215
        218
        266
        267
        268
        337
        404
        474
        540
        546
        547
        551
        582
        652
        706
        710
        774
        775
        782
        785
        793
        933
        948
        2595
        3225
        3226
        3381
        3680
        4220
        4722
        4723
        4988
        6001
        6002
        6003
        6018
        6025
        6169
        7008
        7027
        7139
      Multi_point (202)
      Pos_neg_data (26)
    Landmark_gene
  Reference (203)
  Method: Gene