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WormBase Tree Display for Gene: WBGene00000049

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Name Class

WBGene00000049SMapS_parentSequenceR02E12
IdentityVersion1
NameCGC_nameacr-10Person_evidenceWBPerson1430
Sequence_nameR02E12.8
Molecular_nameR02E12.8
R02E12.8.1
CE48006
Other_nameCELE_R02E12.8Accession_evidenceNDBBX284606
Public_nameacr-10
DB_infoDatabaseAceViewgeneXE641
WormQTLgeneWBGene00000049
WormFluxgeneWBGene00000049
NDBlocus_tagCELE_R02E12.8
PanthergeneCAEEL|WormBase=WBGene00000049|UniProtKB=Q21645
familyPTHR18945
NCBIgene191598
RefSeqproteinNM_076291.5
TrEMBLUniProtAccQ21645
UniProt_GCRPUniProtAccQ21645
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:19WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classacr
Allele (66)
StrainWBStrain00032942
WBStrain00037483
WBStrain00032973
RNASeq_FPKM (74)
GO_annotation (28)
Ortholog (35)
ParalogWBGene00000042Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000043Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000044Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000045Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000046Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00000047Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000048Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00006784Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00001586Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00001587Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00001588Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00000233Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00002974Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00006765Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00006774Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000951Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00001133Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00006797Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00001591Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00001592Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00001593Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00008280Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00009799Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00010275Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00010741Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00018880Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00000058Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00001512Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00000060Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000055Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000061Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000955Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00002975Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00017580Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000056Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00043066Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000050Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000059Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00019069Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00015412Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00022247Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000054Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00020048Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000053Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00017375Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00010994Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00021981Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000062Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000057Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000051Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00012857Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00013534Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00008997Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00020836Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00017389Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00008551Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00000845Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00007903Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00007191Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00022283Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00011360Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00011359Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00011358Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00013655Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00011356Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00011355Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00020236Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00011354Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00045385Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00007594Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00044301Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00017543Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00017544Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00013338Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00013300Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00020528Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00013517Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00000232Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00020767Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00021146Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00022106Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00008223Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00020657Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00013746Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00008076Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00008022Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00017314Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00021437Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00009790Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00003386Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00020605Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00001594Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00017399Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00020569Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00012099Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00013914Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00001373Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00012915Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00017483Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00044528Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionConcise_descriptionacr-10 encodes an alpha-7-like homomer-forming subunit of the nicotinic acetylcholine receptor (nAChR) superfamily which encode ligand-gated ion channels that regulate fast action of acetylcholine at neuromuscular junctions and in the nervous system; ACR-10 is a member of the ACR-16-like group of nAChR subunits.Paper_evidenceWBPaper00003425
WBPaper00005427
WBPaper00005594
Curator_confirmedWBPerson48
WBPerson1843
Date_last_updated17 Jun 2004 00:00:00
Automated_descriptionPredicted to enable excitatory extracellular ligand-gated monoatomic ion channel activity and transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential. Predicted to be involved in excitatory postsynaptic potential and monoatomic ion transmembrane transport. Predicted to be located in neuron projection and synapse. Human ortholog(s) of this gene implicated in several diseases, including Alzheimer's disease; Lewy body dementia; carcinoma (multiple); and inflammatory bowel disease (multiple). Is an ortholog of human CHRFAM7A (CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion) and CHRNA7 (cholinergic receptor nicotinic alpha 7 subunit).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:10652Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:1960)
DOID:3908Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:1960)
DOID:3748Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:1960)
DOID:8778Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:1960)
DOID:3083Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:1960)
DOID:12217Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:1960)
DOID:8577Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:1960)
DOID:1324Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:1960)
DOID:7474Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:1960)
DOID:5419Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:1960)
Molecular_infoCorresponding_CDSR02E12.8
Corresponding_CDS_historyR02E12.8:wp222
R02E12.8:wp234
Corresponding_transcriptR02E12.8.1
Other_sequenceHQ012679.1
JI174913.1
Tcol_isotig18830
JI241466.1
JI462949.1
Associated_featureWBsf1004809
WBsf1004810
Experimental_infoRNAi_resultWBRNAi00051142Inferred_automaticallyRNAi_primary
WBRNAi00066385Inferred_automaticallyRNAi_primary
WBRNAi00009027Inferred_automaticallyRNAi_primary
Expr_patternExpr1011124
Expr1154851
Expr2009178
Expr2027417
Microarray_results (20)
Expression_cluster (26)
Map_infoMapXPosition-8.62284Error0.056079
PositivePositive_cloneR02E12Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
Reference (13)
RemarkR02E12.1 has disappeared into R02E12.8, so changing Locus-sequence link.[sdm 000921]
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene